Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824479.1_cds_XP_016501926.1_15617
CDS Infomation

[gene=LOC107820209] [db_xref=GeneID:107820209] [protein=mitogen-activated protein kinase kinase kinase YODA-like] [protein_id=XP_016501926.1] [location=join(12128..12681,12793..13497,13741..13828,14065..14127,14410..14570,14692..14767,15577..15636,15723..15830,15907..16146,17111..17572)] [gbkey=CDS]
Sequence

ATGCGTTCATGGTGGGGGAAGTCTTCATCTAAGGATGTAAGGAGGAAATCCAAGAAGGAA
CGTTTCATTGATACAATAAGTAGGAAACTGAAGATTTTCACCGAGGAAAAATCGAGTGGT
AAATCTGGATCATCTCGAAGAAGATGTAATGATATTATTTCAGAAAAGGGTTCTCAATCA
AGGGTTTCCAGGTCACCATCACCATCTACGCCAGCTTCATGCTGTCAGAGCTTTGTTGAT
AGGACTTCTTCTCAACCACTTCCCCTTCCTGAGGGTCACTTTTCTAATGTACATCTTGTC
GACTCTGAGAACAGTGCATCCATAAAATCAGTGACTAGTGGAGACTCCAAGCCATCATTG
ACTTTGCCTCTTCCCATGCCTAGGCATCCTCCAAATGGACCAGCTGCTACAGGGGTTGAC
AAGGACTTACCAACTGCTTCTGTTTCATGTGACAGCTCCAGTGACAGTGATGACCCTGCT
GACTCACGGCTTCTTAGCCCCCAAACATCTGATTATGAAAACGGGAGCAGAACTGCCTTG
AATAGTCCTTCCAGTTTGAAGCAGAAGGTTCAATCTCCTATTGCATCCAAAGCAAGTCCA
GGAGAGTCTAACAATCAGGTGATCCCTACATCTCCTAGACAGAGGCTTTTAAACTCTCAT
GTGGCAGACTTACAGATTCCTCATCATGGTGTTATCTATAGTGCTCCTGACAGCTCGATG
TCAAGTCCTTCAAGAAGTCCCATGAGGGTATTCGGGCATGAACCGGTCATGAACTTTGGT
TTCTGGCTAGGGAAGCCACATGGAGACATAACCTTATTAGGATCAGGGCACTGCTCTAGT
CCAGGTTCAGTCCAGAATTCAGGACAAAATTCAATTGGAGGTGATATGTCAGCACAGCCC
TTTTGGCCACACAGCAGGTGTAGTCCTGAGTGTTCACCTGTACCTAGCCCCAGAATGACT
AGTCCTGCTCCTGGCTCTAGGATACATAGTGGTGCTGTAACTCCTTTGCATCCTCGATCT
GGTGGGACATCGGCTGAATCTTCCACAGCCTGGCTTGATGATGGAAAACAGCAAAGTCAC
CGGCTGCCTCTTCCTCCCATATCAATCCCTCATTCTCATTTTTCTCCATATTCAGTGGCT
CCTGCAATTCCACGAAGTCCTGGTAGGACAGAAAATCCTCCAATCCCAGGGTCACGATGG
AAGAAAGGACGTCTGATTGGCAGAGGCACATTTGGACATGTGTACCTTGGTTTTAACAGT
GAAAGTGGTGAGATGTGTGCAATGAAGGAAGTAACACTTTTTTCAGATGATGCTAAGTCA
AGAGAGAGTGCACAGCAACTTGGACAAGAAATATCACTGCTAAGTCGGTTGCGCCATCCA
AATATCGTGCAATATTATGGATCTGAGTCGGTAGATGACAAACTATACATATACCTTGAG
TATGTCTCTGGTGGTTCAATCTATAAAATTCTTCAAGAATATGGTCAGTTGGGTGAGCTA
GCAATTCAAAGTTACACTAAGCAAATTTTGTCTGGGCTAGCATATTTGCATGCTAAAAAC
ACAGTGCATAGAGATATTAAAGGGGCAAACATACTGGTTGACCCAAGTGGCCGCGTTAAA
TTGGCAGATTTTGGGATGGCAAAACATATAACTGGTCAATACTGTCCTTTGTCTTTCAAG
GGAAGTCCTTATTGGATGGCGCCTGAGGTTATTAAAAATTCAAGTGGTTGCAATCTTGCG
GTAGATATATGGAGCCTTGGATGTACAATTCTGGAGATGGCAACGACAAAACCACCTTGG
AGTCAGTATGAGGGGGTTGCTGCTATATTTAAGATTGGAAACAGCAAGGAACTCCCTTTG
ATCCCCTACCACCTCTCAGATGAGGGCAAGGATTTTGTGTGGCAATGTCTACAACGCAAT
CCATTCCATCGTCCAACAGCTTCTCAGCTCTTGGAACATCCCTTTGTCAGGAGTAGCGTT
CCGGTGGAAAGACCCATTCTAAGTCTTGAACCTGCAGAAATAATACCTCCACTCATGCCT
ACTGTGAGATCAGTGGCCGTCGGACAATCACCTAAGCATATGAGTGGGAGACTCTCCCCC
TCCATCATATCAAGCCCCCGTGCTGTATCTGGTTCAACAACACCTCTTAGTGGTGGCGGT
GGTGCTGCTCCACTATTTAACTCAATGACCTATTCATCAGAAGGCATAGGAACTTCTTCA
AGGGCCCAAAGAAGCTTTCACCCTAATGGTGAAACTAGTCACGATCTGAATCCTGACATG
TTTCGAGGGACTTCTCAATCCCATTTGATCCAAGAAACACTTCCATCTGACAATGGTTTT
GTTGGAGATAATTTTGGGGGCCCGGCTCAAAGGGGCGTGACTGAACAACCATATCAGGGA
CAGTCAGTATTAGCTAATAGGGTTGCGCAGCAGCTCCTGAGGGATCAAGTAAAATTGGGC
CCATCGTTTGACCTGAATCCTGGCTCTCCAGTATTTGGTCAGGATAATGGGGTTTAA

Peptide Sequence

PEP ID

XP_016501926.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Nicotiana tabacum]
Sequence

MRSWWGKSSSKDVRRKSKKERFIDTISRKLKIFTEEKSSGKSGSSRRRCNDIISEKGSQS
RVSRSPSPSTPASCCQSFVDRTSSQPLPLPEGHFSNVHLVDSENSASIKSVTSGDSKPSL
TLPLPMPRHPPNGPAATGVDKDLPTASVSCDSSSDSDDPADSRLLSPQTSDYENGSRTAL
NSPSSLKQKVQSPIASKASPGESNNQVIPTSPRQRLLNSHVADLQIPHHGVIYSAPDSSM
SSPSRSPMRVFGHEPVMNFGFWLGKPHGDITLLGSGHCSSPGSVQNSGQNSIGGDMSAQP
FWPHSRCSPECSPVPSPRMTSPAPGSRIHSGAVTPLHPRSGGTSAESSTAWLDDGKQQSH
RLPLPPISIPHSHFSPYSVAPAIPRSPGRTENPPIPGSRWKKGRLIGRGTFGHVYLGFNS
ESGEMCAMKEVTLFSDDAKSRESAQQLGQEISLLSRLRHPNIVQYYGSESVDDKLYIYLE
YVSGGSIYKILQEYGQLGELAIQSYTKQILSGLAYLHAKNTVHRDIKGANILVDPSGRVK
LADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTILEMATTKPPW
SQYEGVAAIFKIGNSKELPLIPYHLSDEGKDFVWQCLQRNPFHRPTASQLLEHPFVRSSV
PVERPILSLEPAEIIPPLMPTVRSVAVGQSPKHMSGRLSPSIISSPRAVSGSTTPLSGGG
GAAPLFNSMTYSSEGIGTSSRAQRSFHPNGETSHDLNPDMFRGTSQSHLIQETLPSDNGF
VGDNFGGPAQRGVTEQPYQGQSVLANRVAQQLLRDQVKLGPSFDLNPGSPVFGQDNGV

Transcript Sequence

Gene sequence data has not been registered.